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ValIdated Systematic IntegratiON of hematopoietic epigenomes

The VISION project aims to harvest truly valuable information from the flood of epigenomic data on hematopoietic cells as
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Mission
Project Overview
Publications

Resources

BX VISION Browser: Epigenomic features, 3D interaction domains, transcriptomes
IDEAS: Two-dimensional segmentation for epigenetic states
ENCODE SCREEN: Candidate Regulatory Elements in human and mouse
3D Genome Browser: Chromatin interaction data
HbVar: Hemoglobin variants and thalassemia mutations
Single cell map of HSPCs
Mouse-human translation: Conservation of TF occupancy and expression profiles
SBR-Blood: Transcriptome and epigenome data
cCRE db: Database of human and mouse cCREs and annotations
Downloads: Available datasets
LanceOtron: Machine learning solutions for genomic signal extraction and analysis
SOM: self organizing map
DNA
RNA corrected

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Supported by the National Institute for Diabetes and Digestive Diseases, NIH