This includes all the cCREs with each track being colored by the dominant state within that cell type. To limit the tracks to the actuated cCREs the filter is set to display cCREs with a value of one or greater. The user can adjust this setting. Setting a value of zero will show all the cCREs, while setting the value above one sets a more stringent threshold for actuated. There were 3 cell type replicates that did not have a DHS signal. For the one replicate of MK that was missing, the values from the other replicate were used. For the EOS cell type a value of 1 was used for all cCREs.
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes. Guanjue Xiang, et al. biorxiv