#track meryIdeasSuper (ideas.ra)

track ideasJointMay2021Nbp
shortLabel Signal p-value
longLabel FDR -log10(NB p-value) signal for joint segmentations
type bigWig 0 16
group vision
compositeTrack on
subGroup1 cell Cell ave=Average B=B CD34_E=CD34_E CLP=CLP CMP=CMP EOS=EOS ERY=ERY GMP=GMP HSC=HSC HUDEP1=HUDEP1 HUDEP2=HUDEP2 K562=K562 LMPP=LMPP MEP=MEP MK=MK MONc=MONc MONp=MONp MPP=MPP NEU=NEU NK=NK T_CD4=T_CD4 T_CD8=T_CD8
subGroup2 mark Feature ATAC=ATAC CTCF=CTCF H3K4me1=H3K4me1 H3K4me3=H3K4me3 H3K9me3=H3K9me3 H3K27ac=H3K27ac H3K27me3=H3K27me3 H3K36me3=H3K36me3
dimensions dimX=mark dimY=cell


track ideasJointMay2021Rc
shortLabel Signal norm. counts
longLabel Normalized read counts for joint segmentations
type bigWig 0 100
group vision
compositeTrack on
subGroup1 cell Cell ave=Average B=B CD34_E=CD34_E CLP=CLP CMP=CMP EOS=EOS ERY=ERY GMP=GMP HSC=HSC HUDEP1=HUDEP1 HUDEP2=HUDEP2 K562=K562 LMPP=LMPP MEP=MEP MK=MK MONc=MONc MONp=MONp MPP=MPP NEU=NEU NK=NK T_CD4=T_CD4 T_CD8=T_CD8
subGroup2 mark Feature ATAC=ATAC CTCF=CTCF H3K4me1=H3K4me1 H3K4me3=H3K4me3 H3K9me3=H3K9me3 H3K27ac=H3K27ac H3K27me3=H3K27me3 H3K36me3=H3K36me3
dimensions dimX=mark dimY=cell

track meryHg38f8Js25BpSJ
shortLabel IDEAS human-mouse
longLabel IDEAS Human-Mouse joint segmentation with 25 states from May 2021
type bigBed 9 .
group vision
compositeTrack on
html meryHg38f8Js25BpSJ.html
visibility dense
noScoreFilter on
priority 1

track meryHg38f8s29BpSJ
shortLabel IDEAS Human
longLabel IDEAS Human only segmentation with 29 states from May 2021
type bigBed 9 .
group vision
compositeTrack on
html meryHg38f8s29BpSJ.html
visibility hide
noScoreFilter on

track ideasJointSept2021cCRE
shortLabel cCRE 
longLabel cCREs for Human-Mouse joint segmentation with 25 states 
type bigBed 9 .
itemRgb on
group vision
bigDataUrl ccreFunJmc.hg38.bb
visibility dense
noScoreFilter on
priority 2