track meryJM21Signals
shortLabel Epigenetic signals
longLabel Epigenetic signals
superTrack on
type bigWig 0 20
html meryJM21Signals.html
priority 2

track meryJM21nbp
parent meryJM21Signals
shortLabel Signal p-value
longLabel FDR -log10(NB p-value) signal for joint run from May 2021
type bigWig 0 16
compositeTrack on
visibility hide
subGroup1 cell Cell Ave=Averge B=B CFUE=CFUE CFUMK=CFUMK CLP=CLP CMP=CMP ER4=ER4 ERY_ad=ERY_ad ERY_fl=ERY_fl G1E=G1E GMP=GMP HPC7=HPC7 iMEL=iMEL iMK=iMK LSK=LSK MEL=MEL MEP=MEP MK=MK MON=MON NEU=NEU NK=NK T_CD4=T_CD4 T_CD8=T_CD8
subGroup2 mark Mark ATAC=ATAC CTCF=CTCF H3K27ac=H3K27ac H3K27me3=H3K27me3 H3K36me3=H3K36me3 H3K4me1=H3K4me1 H3K4me3=H3K4me3 H3K9me3=H3K9me3
dimensions dimX=mark dimY=cell
html meryJM21nbp.html
priority 2

track meryJM21rc
parent meryJM21Signals
shortLabel Signal normalized counts
longLabel Normalized read counts for joint run from May 2021
type bigWig 0 20
compositeTrack on
visibility hide
subGroup1 cell Cell Ave=Averge B=B CFUE=CFUE CFUMK=CFUMK CLP=CLP CMP=CMP ER4=ER4 ERY_ad=ERY_ad ERY_fl=ERY_fl G1E=G1E GMP=GMP HPC7=HPC7 iMEL=iMEL iMK=iMK LSK=LSK MEL=MEL MEP=MEP MK=MK MON=MON NEU=NEU NK=NK T_CD4=T_CD4 T_CD8=T_CD8
subGroup2 mark Mark ATAC=ATAC CTCF=CTCF H3K27ac=H3K27ac H3K27me3=H3K27me3 H3K36me3=H3K36me3 H3K4me1=H3K4me1 H3K4me3=H3K4me3 H3K9me3=H3K9me3
dimensions dimX=mark dimY=cell
html meryJM21rc.html
priority 1

#Epigenetic_State/VBSJ_ES_J25_mm10/Tracks/trackDb_S3V2_IDEAS_mm10_r3_withHg38Mm10prior.txt
track meryMm10f8Js25VIS
shortLabel IDEAS Epigenetic states
longLabel Human-Mouse joint segmentation with 25 states from May 2021
type bigBed 9 .
compositeTrack on
itemRgb on
visibility dense
maxItems 100000
priority 1

track ideasJointCandCRE
shortLabel Candidate CREs
longLabel Candidate CREs
type bigBed 9 .
superTrack on 
priority 3

track ideasJointMay2021cCRE
parent ideasJointCandCRE
shortLabel cCREs
longLabel cCREs for Human-Mouse joint segmentation with 25 states from May 2021
type bigBed 9 .
itemRgb on
bigDataUrl ccreFunJmc.mm10.bb
noScoreFilter on
visibility dense
html ideasJointMay2021cCRE.html
priority 1

track ideasJM21esRP
shortLabel Epigenetic state Regulatory Potential
longLabel Epigenetic state Regulatory Potential
superTrack on 
priority 4
type bigWig